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SRX3462188: AK20
1 ILLUMINA (Illumina HiSeq 4000) run: 2.5M spots, 373.3M bases, 138.7Mb downloads

Design: Sau3A1 and SpeI double digest
Submitted by: USGS
Study: Lagopus leucura Raw sequence reads
show Abstracthide Abstract
The delineation of intraspecific units that are evolutionarily and demographically distinct is an important step in the development of species-specific management plans. Neutral genetic variation has served as the primary data source for delineating units for conservation, but with recent advances in genomic technology, we now have an unprecedented ability to utilize information about neutral and adaptive variation across the entire genome. Here, we use traditional genetic markers (microsatellites) and a newer reduced-representation genomic approach (single nucleotide polymorphisms) to delineate distinct groups of white-tailed ptarmigan (Lagopus leucura), an alpine-obligate species that is distributed in naturally fragmented habitats from Alaska to New Mexico.
Sample:
SAMN08132787 • SRS2750356 • All experiments • All runs
Organism: Lagopus leucura
Library:
Name: AK20
Instrument: Illumina HiSeq 4000
Strategy: WGS
Source: GENOMIC
Selection: Reduced Representation
Layout: SINGLE
Runs: 1 run, 2.5M spots, 373.3M bases, 138.7Mb
Run# of Spots# of BasesSizePublished
SRR63666082,471,986373.3M138.7Mb2017-12-11

ID:
4822202

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